Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917236.1_cds_XP_016466867.1_59679
CDS Infomation

[gene=LOC107789542] [db_xref=GeneID:107789542] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016466867.1] [location=complement(40732..42132)] [gbkey=CDS]
Sequence

ATGGAAGACATTAGTATCTTACAATATGCTACACGATTTCCTGAAATACCAAAAATTCCA
CTATGCATGAGACTTGAGGATCAGAACAACGATGACTATGATCCTAAAGTTGTTTCGTTG
GGGCCTTACCACCATGGAAAGCCGGAGCTCAAGTTTGTCGAAGATTTCAAGCCCGTGGCT
CTACAAATGTTTATTCATGGCAGTGATAAAAACCAAGATTTCTTCCTCGAAAAAATTCTC
GAGGAGATCGAAGATGCTAAAAGTTGTTACTACGACATGGAAGATACATGTATTGACGAC
AATGCTTTTGCTCAAATGATGCTTCTTGATGCATGTTTCGTTCTAAATTATATCGAGTTC
GTAAACCAGTGGTCGTTCAATTATAAATGTCGCACTTTGTTTTGGCATCTTGGTTATGGA
GTTTGTTCTCTTGTTCGACGCGATATGTTTTTGCTTGAAAATCAGGTTCCTTTTGGGATT
CTCAAACTTTTGTTTAATTTAAGATTTGGTGGATGTGGATTTGAAGAGATGTTGCAAAGC
TATTGTTGTCAACTTTTTTTCGGCCAACTAGATTCGAGAAATAATGTGTTGATGGAGCCA
CAACCCTCTCATCTTTTTGAACTTCTTCGAAGAGCGCTTGTGAGTGGTAACTATCAACAT
CTCGAACAATCCCACCGTGGTTTCAAGTGGAGAAAGAATAATAGTAGTAGTAATGAAAAC
AGACCGACAATTACATGTCCCTTGGTTTTCCGTCCAATGATGGATCTTATATCAAAATGC
ATTGATCAATATTGTGGTAACAAGAAAGAAGACAAGCCGATGGTAACAGAATCATCCGAT
ATGTTTCATTCAGTAATGGAGCTGAAATCGAAGGGTGTTCGTTTTATGCCAAGCGGGTTC
GGTTCTTTGAAGGCTGTAAGGTTTACGTCTCATTGTTACTATGCGAAACTCTCACTTCCA
TGTTGGTATGTCTCTGAGTACACTAGAGTATTTTTCCGGAACATGATAGCTTATGAGAGC
TGTCCAGGTAATAATAGTGATTGCTCTCTCTCTGCTTACATATATTTCATGAAAACACTT
GTCATTTCACCTAATGATGCGAAAGAGCTACGAGAAAAGAAGATTATATTCAACCATCTG
GGAAGTGATGAACAAGTGGTACAAGTCTTTAGAGCATTGAAAACTTATGTACATGTGAAA
AGTAATTACAAGGATGTCAAAGAGCAAATCGAAGAGCACTGTAACAGAAAGTCGCAGACT
TGGATTGCTCAACTGTTAGATACCTATTTTACAAGTCCCTGGACTCTACTCGCTTTGTTT
GCTGCTACTTCCCTCCTTTTCCTTACTATACTTCAGACCTACTATGCATCTCCATTTTAT
TCTCACGCCAAAGGATCTTAA

Peptide Sequence

PEP ID

XP_016466867.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MEDISILQYATRFPEIPKIPLCMRLEDQNNDDYDPKVVSLGPYHHGKPELKFVEDFKPVA
LQMFIHGSDKNQDFFLEKILEEIEDAKSCYYDMEDTCIDDNAFAQMMLLDACFVLNYIEF
VNQWSFNYKCRTLFWHLGYGVCSLVRRDMFLLENQVPFGILKLLFNLRFGGCGFEEMLQS
YCCQLFFGQLDSRNNVLMEPQPSHLFELLRRALVSGNYQHLEQSHRGFKWRKNNSSSNEN
RPTITCPLVFRPMMDLISKCIDQYCGNKKEDKPMVTESSDMFHSVMELKSKGVRFMPSGF
GSLKAVRFTSHCYYAKLSLPCWYVSEYTRVFFRNMIAYESCPGNNSDCSLSAYIYFMKTL
VISPNDAKELREKKIIFNHLGSDEQVVQVFRALKTYVHVKSNYKDVKEQIEEHCNRKSQT
WIAQLLDTYFTSPWTLLALFAATSLLFLTILQTYYASPFYSHAKGS

Transcript Sequence

Gene sequence data has not been registered.